- hpan
rti.org - Research Triangle Park, NC
download imageHelen Pan
Expertise
Genomics
Bioinformatics
Genotyping
Biological Pathways
Biography
Helen Pan, PhD, has over 14 years of experience in genomics and bioinformatics, in analyzing data generated from high-throughput technologies from genomics, in proteomics, and in metabolomics in the context of biological pathways and networks to address biological questions. As domain expert and QA specialist for data coordination and repository projects, Dr. Pan also has experience in defining data element requirements and assessing data quality. She has co-authored over 22 scientific papers and 24 patents.
Education
PhD, Biochemistry, University of Oklahoma; MS, Biochemistry, University of Oklahoma; BS, Biology, East China Normal University.
Selected Publications
Donofrio, N.M., Oh, Y., Lundy, R., Pan, H., Brown, D.E., Jeong, J.S., Coughlan, S., Mitchell, T.K., & Dean, R.A. (2006 Sep). Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea. Fungal genetics and biology, 43 (9):605-617.
Thon, M.R., Pan, H., Diener, S., Papalas, J., Taro, A., Mitchell, T.K., & Dean, R.A. (2006). The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae. Genome Biology, 7 (2):R16.
Kudo, M., Bao, M., D'Souza, A., Ying, F., Pan, H., Roe, B.A., & Canfield, W.M. (2005 Oct 28). The alpha- and beta-subunits of the human UDP-N-acetylglucosamine:lysosomal enzyme N-acetylglucosamine-1-phosphotransferase [corrected] are encoded by a single cDNA. Journal of Biological Chemistry, 280 (43):36141-36149.
Dean, R.A., Talbot, N.J., Ebbole, D.J., Farman, M.L., Mitchell, T.K., Orbach, M.J., Thon, M., Kulkarni, R., Xu, J.R., Pan, H., Read, N.D., Lee, Y.H., Carbone, I., Brown, D., Oh, Y.Y., Donofrio, N., Jeong, J.S., Soanes, D.M., Djonovic, S., Kolomiets, E., Rehmeyer, C., Li, W., Harding, M., Kim, S., Lebrun, M.H., Bohnert, H., Coughlan, S., Butler, J., Calvo, S., Ma, L.J., Nicol, R., Purcell, S., Nusbaum, C., Galagan, J.E., & Birren, B.W. (2005 Apr 21). The genome sequence of the rice blast fungus Magnaporthe grisea. Nature, 434 (7036):980-986.
Kulkarni, R.D., Thon, M.R., Pan, H., & Dean, R.A. (2005). Novel G-protein-coupled receptor-like proteins in the plant pathogenic fungus Magnaporthe grisea. Genome Biology, 6 (3):R24.
Ebbole, D.J., Jin, Y., Thon, M., Pan, H., Bhattarai, E., Thomas, T., & Dean, R. (2004 Dec). Gene discovery and gene expression in the rice blast fungus, Magnaporthe grisea: analysis of expressed sequence tags. Molecular Plant-Microbe Interactions, 17 (12):1337-1347.
Chernova, O.B., Hunyadi, A., Malaj, E., Pan, H., Crooks, C., Roe, B., & Cowell, J.K. (2001 Aug 30). A novel member of the WD-repeat gene family, WDR11, maps to the 10q26 region and is disrupted by a chromosome translocation in human glioblastoma cells. Oncogene, 20 (38):5378-5392.